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authorBo Borgerson <gigabo@gmail.com>2008-04-05 13:33:51 -0400
committerJim Meyering <meyering@redhat.com>2008-06-17 22:36:51 +0200
commit20905b0cdcb960c9949763c606f15e7e09d02e00 (patch)
tree4857729dfcb9dfa816027a106567c166e8260271
parent322c6f2e5cd3d09ed31d9d8dea2310d70f47842a (diff)
downloadcoreutils-20905b0cdcb960c9949763c606f15e7e09d02e00.tar.xz
sort: accept new option --batch-size=NMERGE
* src/sort.c: (static unsigned int nmerge) Replace constant NMERGE. (specify_nmerge) Validate and apply new option. (mergefps) Replace some arrays with pointers to xnmalloc'd storage. * tests/misc/sort-merge: Test new option. * doc/coreutils.texi: Describe new option. * NEWS: Advertise new option.
-rw-r--r--NEWS4
-rw-r--r--doc/coreutils.texi23
-rw-r--r--src/sort.c115
-rwxr-xr-xtests/misc/sort-merge43
4 files changed, 171 insertions, 14 deletions
diff --git a/NEWS b/NEWS
index 745a2c71b..df0b965e9 100644
--- a/NEWS
+++ b/NEWS
@@ -23,6 +23,10 @@ GNU coreutils NEWS -*- outline -*-
instead of filenames passed on the command-line to avoid problems with
maximum command-line (argv) length.
+ sort accepts a new option --batch-size=NMERGE, where NMERGE
+ represents the maximum number of inputs that will be merged at once.
+ When processing more than NMERGE inputs, sort uses temporary files.
+
** Bug fixes
chcon --verbose now prints a newline after each message
diff --git a/doc/coreutils.texi b/doc/coreutils.texi
index e4a979e61..f7b9e7844 100644
--- a/doc/coreutils.texi
+++ b/doc/coreutils.texi
@@ -3804,6 +3804,29 @@ multiple fields.
Example: To sort on the second field, use @option{--key=2,2}
(@option{-k 2,2}). See below for more examples.
+@item --batch-size=@var{nmerge}
+@opindex --batch-size
+@cindex number of inputs to merge, nmerge
+Merge at most @var{nmerge} inputs at once.
+
+When @command{sort} has to merge more than @var{nmerge} inputs,
+it merges them in groups of @var{nmerge}, saving the result in
+a temporary file, which is then used as an input in a subsequent merge.
+
+A large value of @var{nmerge} may improve merge performance and decrease
+temporary storage utilization at the expense of increased memory usage
+and I/0. Conversely a small value of @var{nmerge} may reduce memory
+requirements and I/0 at the expense of temporary storage consumption and
+merge performance.
+
+The value of @var{nmerge} must be at least 2.
+
+The value of @var{nmerge} may be bounded by a resource limit for open
+file descriptors. Try @samp{ulimit -n} or @samp{getconf OPEN_MAX} to
+to display the limit for a particular system.
+If the value of @var{nmerge} exceeds this limit, then @command{sort} will
+issue a warning to standard error and exit with a nonzero status.
+
@item -o @var{output-file}
@itemx --output=@var{output-file}
@opindex -o
diff --git a/src/sort.c b/src/sort.c
index 8fb943af9..13935218a 100644
--- a/src/sort.c
+++ b/src/sort.c
@@ -224,13 +224,16 @@ static struct month monthtab[] =
};
/* During the merge phase, the number of files to merge at once. */
-#define NMERGE 16
+#define NMERGE_DEFAULT 16
/* Minimum size for a merge or check buffer. */
#define MIN_MERGE_BUFFER_SIZE (2 + sizeof (struct line))
/* Minimum sort size; the code might not work with smaller sizes. */
-#define MIN_SORT_SIZE (NMERGE * MIN_MERGE_BUFFER_SIZE)
+#define MIN_SORT_SIZE (nmerge * MIN_MERGE_BUFFER_SIZE)
+
+/* Maximum merge buffers we can theoretically support */
+#define MAX_NMERGE (SIZE_MAX / MIN_MERGE_BUFFER_SIZE)
/* The number of bytes needed for a merge or check buffer, which can
function relatively efficiently even if it holds only one line. If
@@ -282,6 +285,10 @@ static struct keyfield *keylist;
/* Program used to (de)compress temp files. Must accept -d. */
static char const *compress_program;
+/* Maximum number of files to merge in one go. If more than this
+ number are present, temp files will be used. */
+static unsigned int nmerge = NMERGE_DEFAULT;
+
static void sortlines_temp (struct line *, size_t, struct line *);
/* Report MESSAGE for FILE, then clean up and exit.
@@ -340,6 +347,12 @@ Ordering options:\n\
fputs (_("\
Other options:\n\
\n\
+"), stdout);
+ fputs (_("\
+ --batch-size=NMERGE merge at most NMERGE inputs at once;\n\
+ for more use temp files\n\
+"), stdout);
+ fputs (_("\
-c, --check, --check=diagnose-first check for sorted input; do not sort\n\
-C, --check=quiet, --check=silent like -c, but do not report first bad line\n\
--compress-program=PROG compress temporaries with PROG;\n\
@@ -401,6 +414,7 @@ enum
CHECK_OPTION = CHAR_MAX + 1,
COMPRESS_PROGRAM_OPTION,
FILES0_FROM_OPTION,
+ NMERGE_OPTION,
RANDOM_SOURCE_OPTION,
SORT_OPTION
};
@@ -427,6 +441,7 @@ static struct option const long_options[] =
{"output", required_argument, NULL, 'o'},
{"reverse", no_argument, NULL, 'r'},
{"stable", no_argument, NULL, 's'},
+ {"batch-size", required_argument, NULL, NMERGE_OPTION},
{"buffer-size", required_argument, NULL, 'S'},
{"field-separator", required_argument, NULL, 't'},
{"temporary-directory", required_argument, NULL, 'T'},
@@ -1053,6 +1068,68 @@ inittables (void)
#endif
}
+/* Specify how many inputs may be merged at once.
+ This may be set on the command-line with the
+ --batch-size option. */
+static void
+specify_nmerge (int oi, char c, char const *s)
+{
+ uintmax_t n;
+ struct rlimit rlimit;
+ unsigned int max_nmerge = (unsigned int) MAX_NMERGE;
+ enum strtol_error e = xstrtoumax (s, NULL, 10, &n, NULL);
+
+ /* Try to find out how many file descriptors we'll be able
+ to open. We need at least nmerge + 3 (STDIN_FILENO,
+ STDOUT_FILENO and STDERR_FILENO). */
+ if (getrlimit (RLIMIT_NOFILE, &rlimit) == 0)
+ max_nmerge = MIN (max_nmerge, rlimit.rlim_cur - 3);
+
+ if (e == LONGINT_OK)
+ {
+ nmerge = n;
+ if (nmerge != n)
+ e = LONGINT_OVERFLOW;
+ else
+ {
+ if (nmerge < 2)
+ {
+ error (0, 0, _("invalid --%s argument %s"),
+ long_options[oi].name, quote(s));
+ error (SORT_FAILURE, 0,
+ _("minimum --%s argument is %s"),
+ long_options[oi].name, quote("2"));
+ }
+ else if (max_nmerge < nmerge)
+ {
+ e = LONGINT_OVERFLOW;
+ }
+ else
+ {
+ /* Need to re-check that we meet the minimum
+ requirement for memory usage with the new,
+ potentially larger, nmerge. */
+ sort_size = MAX (sort_size, MIN_SORT_SIZE);
+
+ return;
+ }
+ }
+ }
+
+ if (e == LONGINT_OVERFLOW)
+ {
+ char max_nmerge_buf[INT_BUFSIZE_BOUND (unsigned int)];
+ uinttostr (max_nmerge, max_nmerge_buf);
+ error (0, 0, _("--%s argument %s too large"),
+ long_options[oi].name, quote(s));
+ error (SORT_FAILURE, 0,
+ _("maximum --%s argument with current rlimit is %s"),
+ long_options[oi].name, quote (max_nmerge_buf));
+ }
+ else
+ xstrtol_fatal (e, oi, c, long_options, s);
+}
+
/* Specify the amount of main memory to use when sorting. */
static void
specify_sort_size (int oi, char c, char const *s)
@@ -2037,15 +2114,20 @@ static void
mergefps (struct sortfile *files, size_t ntemps, size_t nfiles,
FILE *ofp, char const *output_file)
{
- FILE *fps[NMERGE]; /* Input streams for each file. */
- struct buffer buffer[NMERGE]; /* Input buffers for each file. */
+ FILE **fps = xnmalloc (nmerge, sizeof *fps);
+ /* Input streams for each file. */
+ struct buffer *buffer = xnmalloc (nmerge, sizeof *buffer);
+ /* Input buffers for each file. */
struct line saved; /* Saved line storage for unique check. */
struct line const *savedline = NULL;
/* &saved if there is a saved line. */
size_t savealloc = 0; /* Size allocated for the saved line. */
- struct line const *cur[NMERGE]; /* Current line in each line table. */
- struct line const *base[NMERGE]; /* Base of each line table. */
- size_t ord[NMERGE]; /* Table representing a permutation of fps,
+ struct line const **cur = xnmalloc (nmerge, sizeof *cur);
+ /* Current line in each line table. */
+ struct line const **base = xnmalloc (nmerge, sizeof *base);
+ /* Base of each line table. */
+ size_t *ord = xnmalloc (nmerge, sizeof *ord);
+ /* Table representing a permutation of fps,
such that cur[ord[0]] is the smallest line
and will be next output. */
size_t i;
@@ -2218,6 +2300,11 @@ mergefps (struct sortfile *files, size_t ntemps, size_t nfiles,
}
xfclose (ofp, output_file);
+ free(fps);
+ free(buffer);
+ free(ord);
+ free(base);
+ free(cur);
}
/* Merge into T the two sorted arrays of lines LO (with NLO members)
@@ -2405,7 +2492,7 @@ static void
merge (struct sortfile *files, size_t ntemps, size_t nfiles,
char const *output_file)
{
- while (NMERGE < nfiles)
+ while (nmerge < nfiles)
{
/* Number of input files processed so far. */
size_t in;
@@ -2421,20 +2508,20 @@ merge (struct sortfile *files, size_t ntemps, size_t nfiles,
size_t cheap_slots;
/* Do as many NMERGE-size merges as possible. */
- for (out = in = 0; out < nfiles / NMERGE; out++, in += NMERGE)
+ for (out = in = 0; out < nfiles / nmerge; out++, in += nmerge)
{
FILE *tfp;
pid_t pid;
char *temp = create_temp (&tfp, &pid);
- size_t nt = MIN (ntemps, NMERGE);
+ size_t nt = MIN (ntemps, nmerge);
ntemps -= nt;
- mergefps (&files[in], nt, NMERGE, tfp, temp);
+ mergefps (&files[in], nt, nmerge, tfp, temp);
files[out].name = temp;
files[out].pid = pid;
}
remainder = nfiles - in;
- cheap_slots = NMERGE - out % NMERGE;
+ cheap_slots = nmerge - out % nmerge;
if (cheap_slots < remainder)
{
@@ -3027,6 +3114,10 @@ main (int argc, char **argv)
mergeonly = true;
break;
+ case NMERGE_OPTION:
+ specify_nmerge (oi, c, optarg);
+ break;
+
case 'o':
if (outfile && !STREQ (outfile, optarg))
error (SORT_FAILURE, 0, _("multiple output files specified"));
diff --git a/tests/misc/sort-merge b/tests/misc/sort-merge
index f90ba9bce..a2524c40c 100755
--- a/tests/misc/sort-merge
+++ b/tests/misc/sort-merge
@@ -19,18 +19,57 @@
use strict;
(my $program_name = $0) =~ s|.*/||;
+my $prog = 'sort';
# Turn off localization of executable's output.
@ENV{qw(LANGUAGE LANG LC_ALL)} = ('C') x 3;
+# three empty files and one that says 'foo'
+my @inputs = (+(map{{IN=> {"empty$_"=> ''}}}1..3), {IN=> {foo=> "foo\n"}});
+
+# don't need to check for existence, since we're running in a temp dir
+my $badtmp = 'does/not/exist';
+
+# 2^64+1
+my $bigint = "18446744073709551617";
+
my @Tests =
(
- ['m1', '-m', {IN=> {empty=> ''}}, {IN=> {f=> "foo\n"}}, {OUT=>"foo\n"}],
+ ['m1', '-m', @inputs, {OUT=>"foo\n"}],
+
+ # check validation of --batch-size option
+ ['nmerge-0', "-m --batch-size=0", @inputs,
+ {ERR=>"$prog: invalid --batch-size argument `0'\n".
+ "$prog: minimum --batch-size argument is `2'\n"}, {EXIT=>2}],
+
+ ['nmerge-1', "-m --batch-size=1", @inputs,
+ {ERR=>"$prog: invalid --batch-size argument `1'\n".
+ "$prog: minimum --batch-size argument is `2'\n"}, {EXIT=>2}],
+
+ ['nmerge-neg', "-m --batch-size=-1", @inputs,
+ {ERR=>"$prog: invalid --batch-size argument `-1'\n"}, {EXIT=>2}],
+
+ ['nmerge-nan', "-m --batch-size=a", @inputs,
+ {ERR=>"$prog: invalid --batch-size argument `a'\n"}, {EXIT=>2}],
+
+ ['nmerge-big', "-m --batch-size=$bigint", @inputs,
+ {ERR_SUBST=>'s/current rlimit is .+\n/current rlimit is/'},
+ {ERR=>"$prog: --batch-size argument `$bigint' too large\n".
+ "$prog: maximum --batch-size argument with current rlimit is"},
+ {EXIT=>2}],
+
+ # This should work since nmerge >= the number of input files
+ ['nmerge-yes', "-m --batch-size=4 -T$badtmp", @inputs, {OUT=>"foo\n"}],
+
+ # this should fail since nmerge < # of input files, so
+ # temp files are needed
+ ['nmerge-no', "-m --batch-size=2 -T$badtmp", @inputs,
+ {ERR_SUBST=>"s|: $badtmp/sort.+||"},
+ {ERR=>"$prog: cannot create temporary file\n"}, {EXIT=>2}],
);
my $save_temps = $ENV{DEBUG};
my $verbose = $ENV{VERBOSE};
-my $prog = 'sort';
my $fail = run_tests ($program_name, $prog, \@Tests, $save_temps, $verbose);
exit $fail;